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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000322.1_g00018.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 327aa MW: 37271.1 Da PI: 4.9921 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.5 | 1.1e-48 | 60 | 186 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 ppGfrF P+d+el+ +yL k v++++l+ + i+ev++yk+ Pw+L + + +ek+wyfF++rd+ky++g+r+nra+ sg+Wkat Itr_sc000322.1_g00018.1 60 PPGFRFCPSDDELIECYLWKMVQNQPLPP-NKIHEVNLYKFSPWELSdMYETVGEKDWYFFTPRDRKYKNGQRPNRAAGSGFWKAT 144 9*************************999.77**************9444445899****************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g dk++++kk+ lvg +k Lvfy+g+ p+g kt+W+mheyr+ Itr_sc000322.1_g00018.1 145 GADKSIMNKKKVLVGYRKALVFYQGKPPRGMKTNWIMHEYRV 186 ****************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.2E-58 | 56 | 214 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.642 | 59 | 214 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.7E-25 | 60 | 186 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MEEFLVPYHT SSTPTIFVGP SSDIAIVHDE NTIVVHKSNN RLINNNSFDD TNNDDGFNFP 60 PGFRFCPSDD ELIECYLWKM VQNQPLPPNK IHEVNLYKFS PWELSDMYET VGEKDWYFFT 120 PRDRKYKNGQ RPNRAAGSGF WKATGADKSI MNKKKVLVGY RKALVFYQGK PPRGMKTNWI 180 MHEYRVEGAP SPRPRGDAND MRLDDWVLCR IYNKTGKSSE KKLGKKFSPP PAEQSATAQA 240 VAVVSPSLPP PPPQIEPGMP PLIGDEFALA QFSFLSGQDE MDELPAFYYL TMENDMMIPN 300 DQPFHTANLD NLFITENDDD SIPKPME |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 9e-59 | 57 | 214 | 13 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016487930.1 | 1e-72 | PREDICTED: NAC transcription factor 29-like | ||||
TrEMBL | K4D3D2 | 1e-71 | K4D3D2_SOLLC; Uncharacterized protein | ||||
TrEMBL | M5X9E7 | 5e-71 | M5X9E7_PRUPE; Uncharacterized protein | ||||
STRING | Solyc10g083450.1.1 | 3e-71 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA746 | 24 | 103 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 2e-62 | NAC domain containing protein 32 |